3ZIT image
Deposition Date 2013-01-10
Release Date 2013-01-23
Last Version Date 2024-11-13
Entry Detail
PDB ID:
3ZIT
Keywords:
Title:
Crystal structure of the thioredoxin-like protein BC3987 mutant T8A
Biological Source:
Source Organism:
BACILLUS CEREUS (Taxon ID: 1396)
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.18 Å
R-Value Free:
0.19
R-Value Work:
0.14
R-Value Observed:
0.14
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:THIOREDOXIN
Gene (Uniprot):BC_3987
Mutations:YES
Chain IDs:A, B
Chain Length:78
Number of Molecules:2
Biological Source:BACILLUS CEREUS
Primary Citation
Tuning of Thioredoxin Redox Properties by Intramolecular Hydrogen Bonds.
Plos One 8 69411 ? (2013)
PMID: 23936007 DOI: 10.1371/JOURNAL.PONE.0069411

Abstact

Thioredoxin-like proteins contain a characteristic C-x-x-C active site motif and are involved in a large number of biological processes ranging from electron transfer, cellular redox level maintenance, and regulation of cellular processes. The mechanism for deprotonation of the buried C-terminal active site cysteine in thioredoxin, necessary for dissociation of the mixed-disulfide intermediate that occurs under thiol/disulfide mediated electron transfer, is not well understood for all thioredoxin superfamily members. Here we have characterized a 8.7 kD thioredoxin (BC3987) from Bacillus cereus that unlike the typical thioredoxin appears to use the conserved Thr8 side chain near the unusual C-P-P-C active site to increase enzymatic activity by forming a hydrogen bond to the buried cysteine. Our hypothesis is based on biochemical assays and thiolate pKa titrations where the wild type and T8A mutant are compared, phylogenetic analysis of related thioredoxins, and QM/MM calculations with the BC3987 crystal structure as a precursor for modeling of reduced active sites. We suggest that our model applies to other thioredoxin subclasses with similar active site arrangements.

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