3ZIF image
Deposition Date 2013-01-09
Release Date 2014-01-22
Last Version Date 2024-05-08
Entry Detail
PDB ID:
3ZIF
Keywords:
Title:
Cryo-EM structures of two intermediates provide insight into adenovirus assembly and disassembly
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
4.50 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:HEXON PROTEIN
Gene (Uniprot):L3
Chain IDs:A, B, C, D, E, F, G, H, I, J, K, L
Chain Length:911
Number of Molecules:12
Biological Source:BOVINE ADENOVIRUS 3
Polymer Type:polypeptide(L)
Molecule:PENTON PROTEIN
Chain IDs:M
Chain Length:482
Number of Molecules:1
Biological Source:BOVINE ADENOVIRUS 3
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:PIX
Chain IDs:N, O, P, Q
Chain Length:125
Number of Molecules:4
Biological Source:BOVINE ADENOVIRUS 3
Polymer Type:polypeptide(L)
Molecule:PVIII
Chain IDs:R
Chain Length:216
Number of Molecules:1
Biological Source:BOVINE ADENOVIRUS 3
Ligand Molecules
Primary Citation
Cryo-Em Structures of Two Bovine Adenovirus Type 3 Intermediates
Virology 450 174 ? (2014)
PMID: 24503080 DOI: 10.1016/J.VIROL.2013.12.012

Abstact

Adenoviruses (Ads) infect hosts from all vertebrate species and have been investigated as vaccine vectors. We report here near-atomic structures of two bovine Ad type 3 (BAd3) intermediates obtained by cryo-electron microscopy. A comparison between the two intermediate structures reveals that the differences are localized in the fivefold vertex region, while their facet structures are identical. The overall facet structure of BAd3 exhibits a similar structure to human Ads; however, BAd3 protein IX has a unique conformation. Mass spectrometry and cryo-electron tomography analyses indicate that one intermediate structure represents the stage during DNA encapsidation, whilst the other intermediate structure represents a later stage. These results also suggest that cleavage of precursor protein VI occurs during, rather than after, the DNA encapsidation process. Overall, our results provide insights into the mechanism of Ad assembly, and allow the first structural comparison between human and nonhuman Ads at backbone level.

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Protein

Chemical

Disease

Primary Citation of related structures
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