3ZGO image
Deposition Date 2012-12-18
Release Date 2013-03-20
Last Version Date 2024-11-06
Entry Detail
PDB ID:
3ZGO
Keywords:
Title:
Re-refined structure of the human Sirt2 apoform
Biological Source:
Source Organism:
HOMO SAPIENS (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.63 Å
R-Value Free:
0.19
R-Value Work:
0.16
R-Value Observed:
0.16
Space Group:
C 2 2 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:NAD-DEPENDENT PROTEIN DEACETYLASE SIRTUIN-2
Gene (Uniprot):SIRT2
Mutations:YES
Chain IDs:A, B, C
Chain Length:325
Number of Molecules:3
Biological Source:HOMO SAPIENS
Primary Citation
Crystal Structure Analysis of Human Sirt2 and its Adp-Ribose Complex
J.Struct.Biol. 182 136 ? (2013)
PMID: 23454361 DOI: 10.1016/J.JSB.2013.02.012

Abstact

Sirtuins are NAD(+)-dependent protein deacetylases that regulate metabolism and aging-related processes. Sirt2 is the only cytoplasmic isoform among the seven mamalian Sirtuins (Sirt1-7) and structural information concerning this isoform is limited. We crystallized Sirt2 in complex with a product analog, ADP-ribose, and solved this first crystal structure of a Sirt2 ligand complex at 2.3Å resolution. Additionally, we re-refined the structure of the Sirt2 apoform and analyzed the conformational changes associated with ligand binding to derive insights into the dynamics of the enzyme. Our analyses also provide information on Sirt2 peptide substrate binding and structural states of a Sirt2-specific protein region, and our insights and the novel Sirt2 crystal form provide helpful tools for the development of Sirt2 specific inhibitors.

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