3ZFG image
Deposition Date 2012-12-11
Release Date 2013-03-27
Last Version Date 2023-12-20
Entry Detail
PDB ID:
3ZFG
Keywords:
Title:
Human enterovirus 71 in complex with capsid binding inhibitor WIN51711
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
3.20 Å
R-Value Work:
0.24
R-Value Observed:
0.24
Space Group:
I 2 3
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:VP1
Chain IDs:A
Chain Length:298
Number of Molecules:1
Biological Source:HUMAN ENTEROVIRUS 71
Polymer Type:polypeptide(L)
Molecule:VP2
Chain IDs:B
Chain Length:254
Number of Molecules:1
Biological Source:HUMAN ENTEROVIRUS 71
Polymer Type:polypeptide(L)
Molecule:VP3
Chain IDs:C
Chain Length:242
Number of Molecules:1
Biological Source:HUMAN ENTEROVIRUS 71
Polymer Type:polypeptide(L)
Molecule:VP4
Chain IDs:D
Chain Length:69
Number of Molecules:1
Biological Source:HUMAN ENTEROVIRUS 71
Ligand Molecules
Primary Citation
Structure of Human Enterovirus 71 in Complex with a Capsid-Binding Inhibitor.
Proc.Natl.Acad.Sci.USA 110 5463 ? (2013)
PMID: 23509286 DOI: 10.1073/PNAS.1222379110

Abstact

Human enterovirus 71 is a picornavirus causing hand, foot, and mouth disease that may progress to fatal encephalitis in infants and small children. As of now, no cure is available for enterovirus 71 infections. Small molecule inhibitors binding into a hydrophobic pocket within capsid viral protein 1 were previously shown to effectively limit infectivity of many picornaviruses. Here we report a 3.2-Å-resolution X-ray structure of the enterovirus 71 virion complexed with the capsid-binding inhibitor WIN 51711. The inhibitor replaced the natural pocket factor within the viral protein 1 pocket without inducing any detectable rearrangements in the structure of the capsid. Furthermore, we show that the compound stabilizes enterovirus 71 virions and limits its infectivity, probably through restricting dynamics of the capsid necessary for genome release. Thus, our results provide a structural basis for development of antienterovirus 71 capsid-binding drugs.

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Primary Citation of related structures