3WXR image
Entry Detail
PDB ID:
3WXR
Keywords:
Title:
Yeast 20S proteasome with a mutation of alpha7 subunit
Biological Source:
PDB Version:
Deposition Date:
2014-08-06
Release Date:
2014-10-22
Method Details:
Experimental Method:
Resolution:
3.15 Å
R-Value Free:
0.24
R-Value Work:
0.17
R-Value Observed:
0.17
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Proteasome subunit alpha type-1
Chain IDs:A, O
Chain Length:252
Number of Molecules:2
Biological Source:Saccharomyces cerevisiae S288c
Polymer Type:polypeptide(L)
Description:Proteasome subunit alpha type-2
Chain IDs:B, P
Chain Length:250
Number of Molecules:2
Biological Source:Saccharomyces cerevisiae S288c
Polymer Type:polypeptide(L)
Description:Proteasome subunit alpha type-3
Chain IDs:C, Q
Chain Length:258
Number of Molecules:2
Biological Source:Saccharomyces cerevisiae S288c
Polymer Type:polypeptide(L)
Description:Proteasome subunit alpha type-4
Chain IDs:D, R
Chain Length:254
Number of Molecules:2
Biological Source:Saccharomyces cerevisiae S288c
Polymer Type:polypeptide(L)
Description:Proteasome subunit alpha type-5
Chain IDs:E, S
Chain Length:260
Number of Molecules:2
Biological Source:Saccharomyces cerevisiae S288c
Polymer Type:polypeptide(L)
Description:Proteasome subunit alpha type-6
Chain IDs:F, T
Chain Length:234
Number of Molecules:2
Biological Source:Saccharomyces cerevisiae S288c
Polymer Type:polypeptide(L)
Description:Probable proteasome subunit alpha type-7
Chain IDs:G, U
Chain Length:277
Number of Molecules:2
Biological Source:Saccharomyces cerevisiae S288c
Polymer Type:polypeptide(L)
Description:Proteasome subunit beta type-1
Chain IDs:H, V
Chain Length:215
Number of Molecules:2
Biological Source:Saccharomyces cerevisiae S288c
Polymer Type:polypeptide(L)
Description:Proteasome subunit beta type-2
Chain IDs:I, W
Chain Length:261
Number of Molecules:2
Biological Source:Saccharomyces cerevisiae S288c
Polymer Type:polypeptide(L)
Description:Proteasome subunit beta type-3
Chain IDs:J, X
Chain Length:205
Number of Molecules:2
Biological Source:Saccharomyces cerevisiae S288c
Polymer Type:polypeptide(L)
Description:Proteasome subunit beta type-4
Chain IDs:K, Y
Chain Length:238
Number of Molecules:2
Biological Source:Saccharomyces cerevisiae S288c
Polymer Type:polypeptide(L)
Description:Proteasome subunit beta type-5
Chain IDs:L, Z
Chain Length:287
Number of Molecules:2
Biological Source:Saccharomyces cerevisiae S288c
Polymer Type:polypeptide(L)
Description:Proteasome subunit beta type-6
Chain IDs:M, AA (auth: 1)
Chain Length:241
Number of Molecules:2
Biological Source:Saccharomyces cerevisiae S288c
Polymer Type:polypeptide(L)
Description:Proteasome subunit beta type-7
Chain IDs:N, BA (auth: 2)
Chain Length:266
Number of Molecules:2
Biological Source:Saccharomyces cerevisiae S288c
Ligand Molecules
Primary Citation
N-terminal alpha 7 deletion of the proteasome 20S core particle substitutes for yeast PI31 function
Mol.Cell.Biol. 35 141 152 (2015)
PMID: 25332237 DOI: 10.1128/MCB.00582-14

Abstact

The proteasome core particle (CP) is a conserved protease complex that is formed by the stacking of two outer α-rings and two inner β-rings. The α-ring is a heteroheptameric ring of subunits α1 to α7 and acts as a gate that restricts entry of substrate proteins into the catalytic cavity formed by the two abutting β-rings. The 31-kDa proteasome inhibitor (PI31) was originally identified as a protein that binds to the CP and inhibits CP activity in vitro, but accumulating evidence indicates that PI31 is required for physiological proteasome activity. To clarify the in vivo role of PI31, we examined the Saccharomyces cerevisiae PI31 ortholog Fub1. Fub1 was essential in a situation where the CP assembly chaperone Pba4 was deleted. The lethality of Δfub1 Δpba4 was suppressed by deletion of the N terminus of α7 (α7ΔN), which led to the partial activation of the CP. However, deletion of the N terminus of α3, which activates the CP more efficiently than α7ΔN by gate opening, did not suppress Δfub1 Δpba4 lethality. These results suggest that the α7 N terminus has a role in CP activation different from that of the α3 N terminus and that the role of Fub1 antagonizes a specific function of the α7 N terminus.

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