3WWR image
Entry Detail
PDB ID:
3WWR
Keywords:
Title:
Crystal structure of the human vitamin D receptor ligand binding domain complexed with 1-((((1S,2R,6R,Z)-2,6-dihydroxy-4-((E)-2-((1R,3aS,7aR)-1-((R)-6-hydroxy-6-methylheptan-2-yl)-7a-methylhexahydro-1H-inden-4(2H)-ylidene)ethylidene)-3-methylenecyclohexyl)oxy)methyl)cyclopropanecarbonitrile
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2014-06-27
Release Date:
2014-12-31
Method Details:
Experimental Method:
Resolution:
3.18 Å
R-Value Free:
0.29
R-Value Work:
0.24
R-Value Observed:
0.24
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Vitamin D3 receptor
Mutations:DELETION (165-215) mutantion
Chain IDs:A
Chain Length:263
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Synthesis and biological activities of vitamin D3 derivatives with cyanoalkyl side chain at C-2 position.
J.Steroid Biochem.Mol.Biol. 148 27 30 (2015)
PMID: 25500068 DOI: 10.1016/j.jsbmb.2014.12.004

Abstact

We synthesized and evaluated novel vitamin D3 derivatives with cyanoalkyl side chain at C-2 position on the basis of our previous research for 2α side chain which bears nitrogen atom-containing functional group. Through a study of X-ray co-crystal structures of human VDR and compound 3, we demonstrated that the 2α alkyl side chain in compound 3 shows a novel interaction in the complex of hVDR-LBD and ligand. This article is part of a Special Issue entitled '17th Vitamin D Workshop'.

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Primary Citation of related structures