3WWM image
Deposition Date 2014-06-21
Release Date 2014-11-19
Last Version Date 2023-11-08
Entry Detail
PDB ID:
3WWM
Keywords:
Title:
Crystal structure of LysZ from Thermus thermophilus with ADP
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.80 Å
R-Value Free:
0.22
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
P 41 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Putative acetylglutamate kinase-like protein
Gene (Uniprot):lysZ
Chain IDs:A
Chain Length:269
Number of Molecules:1
Biological Source:Thermus thermophilus HB27
Ligand Molecules
Primary Citation
Structural insight into amino group-carrier protein-mediated lysine biosynthesis: crystal structure of the LysZ·LysW complex from Thermus thermophilus.
J.Biol.Chem. 290 435 447 (2015)
PMID: 25392000 DOI: 10.1074/jbc.M114.595983

Abstact

In the biosynthesis of lysine by Thermus thermophilus, the metabolite α-ketoglutarate is converted to the intermediate α-aminoadipate (AAA), which is protected by the 54-amino acid acidic protein LysW. In this study, we determined the crystal structure of LysZ from T. thermophilus (TtLysZ), an amino acid kinase that catalyzes the second step in the AAA to lysine conversion, which was in a complex with LysW at a resolution of 1.85 Å. A crystal analysis coupled with isothermal titration calorimetry of the TtLysZ mutants for TtLysW revealed tight interactions between LysZ and the globular and C-terminal extension domains of the LysW protein, which were mainly attributed to electrostatic forces. These results provided structural evidence for LysW acting as a protecting molecule for the α-amino group of AAA and also as a carrier protein to guarantee better recognition by biosynthetic enzymes for the efficient biosynthesis of lysine.

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Primary Citation of related structures