3WVF image
Deposition Date 2014-05-20
Release Date 2014-12-17
Last Version Date 2023-11-08
Entry Detail
PDB ID:
3WVF
Keywords:
Title:
Crystal structure of YidC from Escherichia coli
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.20 Å
R-Value Free:
0.27
R-Value Work:
0.22
R-Value Observed:
0.22
Space Group:
P 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Membrane protein insertase YidC
Gene (Uniprot):yidC
Chain IDs:A, B
Chain Length:551
Number of Molecules:2
Biological Source:Escherichia coli
Ligand Molecules
Primary Citation
Crystal structure of Escherichia coli YidC, a membrane protein chaperone and insertase
Sci Rep 4 7299 7299 (2014)
PMID: 25466392 DOI: 10.1038/srep07299

Abstact

Bacterial YidC, an evolutionally conserved membrane protein, functions as a membrane protein chaperone in cooperation with the Sec translocon and as an independent insertase for membrane proteins. In Gram-negative bacteria, the transmembrane and periplasmic regions of YidC interact with the Sec proteins, forming a multi-protein complex for Sec-dependent membrane protein integration. Here, we report the crystal structure of full-length Escherichia coli YidC. The structure reveals that a hydrophilic groove, formed by five transmembrane helices, is a conserved structural feature of YidC, as compared to the previous YidC structure from Bacillus halodurans, which lacks a periplasmic domain. Structural mapping of the substrate- or Sec protein-contact sites suggested the importance of the groove for the YidC functions as a chaperone and an insertase, and provided structural insight into the multi-protein complex.

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Primary Citation of related structures