3WV0 image
Deposition Date 2014-05-10
Release Date 2014-06-11
Last Version Date 2024-11-20
Entry Detail
PDB ID:
3WV0
Title:
O-glycan attached to herpes simplex virus type 1 glycoprotein gB is recognized by the Ig V-set domain of human paired immunoglobulin-like type 2 receptor alpha
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.30 Å
R-Value Free:
0.29
R-Value Work:
0.23
Space Group:
C 2 2 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Paired immunoglobulin-like type 2 receptor alpha
Mutations:R78G
Chain IDs:A, B
Chain Length:120
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Envelope glycoprotein B
Gene (Uniprot):gB
Chain IDs:C (auth: X), D (auth: Y)
Chain Length:7
Number of Molecules:2
Biological Source:Human herpesvirus 1
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
THR D THR GLYCOSYLATION SITE
Ligand Molecules
Primary Citation
Structural basis for simultaneous recognition of an O-glycan and its attached peptide of mucin family by immune receptor PILR alpha
Proc.Natl.Acad.Sci.USA 111 8877 8882 (2014)
PMID: 24889612 DOI: 10.1073/pnas.1324105111

Abstact

Paired Ig-like type 2 receptor α (PILRα) recognizes a wide range of O-glycosylated mucin and related proteins to regulate broad immune responses. However, the molecular characteristics of these recognitions are largely unknown. Here we show that sialylated O-linked sugar T antigen (sTn) and its attached peptide region are both required for ligand recognition by PILRα. Furthermore, we determined the crystal structures of PILRα and its complex with an sTn and its attached peptide region. The structures show that PILRα exhibits large conformational change to recognize simultaneously both the sTn O-glycan and the compact peptide structure constrained by proline residues. Binding and functional assays support this binding mode. These findings provide significant insight into the binding motif and molecular mechanism (which is distinct from sugar-recognition receptors) by which O-glycosylated mucin proteins with sTn modifications are recognized in the immune system as well as during viral entry.

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Primary Citation of related structures