3WUR image
Deposition Date 2014-05-02
Release Date 2014-10-15
Last Version Date 2024-05-29
Entry Detail
PDB ID:
3WUR
Keywords:
Title:
Structure of DMP19 Complex with 18-crown-6
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.45 Å
R-Value Free:
0.20
R-Value Work:
0.16
R-Value Observed:
0.17
Space Group:
P 41 21 2
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Uncharacterized protein
Gene (Uniprot):NMB0541
Chain IDs:A, B
Chain Length:171
Number of Molecules:2
Biological Source:Neisseria meningitidis
Primary Citation
Crowning proteins: modulating the protein surface properties using crown ethers.
Angew.Chem.Int.Ed.Engl. 53 13054 13058 (2014)
PMID: 25287606 DOI: 10.1002/anie.201405664

Abstact

Crown ethers are small, cyclic polyethers that have found wide-spread use in phase-transfer catalysis and, to a certain degree, in protein chemistry. Crown ethers readily bind metallic and organic cations, including positively charged amino acid side chains. We elucidated the crystal structures of several protein-crown ether co-crystals grown in the presence of 18-crown-6. We then employed biophysical methods and molecular dynamics simulations to compare these complexes with the corresponding apoproteins and with similar complexes with ring-shaped low-molecular-weight polyethylene glycols. Our studies show that crown ethers can modify protein surface behavior dramatically by stabilizing either intra- or intermolecular interactions. Consequently, we propose that crown ethers can be used to modulate a wide variety of protein surface behaviors, such as oligomerization, domain-domain interactions, stabilization in organic solvents, and crystallization.

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