3WJ8 image
Entry Detail
PDB ID:
3WJ8
Keywords:
Title:
Crystal Structure of DL-2-haloacid dehalogenase mutant with 2-bromo-2-methylpropionate
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2013-10-07
Release Date:
2013-11-27
Method Details:
Experimental Method:
Resolution:
2.70 Å
R-Value Free:
0.26
R-Value Work:
0.18
R-Value Observed:
0.19
Space Group:
P 63
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:DL-2-haloacid dehalogenase
Mutations:D54H, D194N
Chain IDs:A, B, C (auth: D), D (auth: E), E (auth: F), F (auth: G)
Chain Length:301
Number of Molecules:6
Biological Source:Methylobacterium
Primary Citation
Binding modes of DL-2-haloacid dehalogenase revealed by crystallography, modeling and isotope effects studies.
Arch.Biochem.Biophys. 540 26 32 (2013)
PMID: 24071515 DOI: 10.1016/j.abb.2013.09.012

Abstact

Several pathways of biotic dechlorination can be found in enzymes, each characterized by different chlorine isotopic fractionation, which can thus serve as a signature of a particular mechanism. Unlike other dehalogenases, DL-2-haloacid dehalogenase, DL-DEX, converts both enantiomers of the substrate. Chlorine isotope effects for this enzyme are larger than in the case of other dehalogenases. Recently, the 3D structure of this enzyme became available and enabled us to model these isotope effects and seek their origin. We show that the elevated values of the chlorine kinetic isotope effects originate in part in the processes of binding and migration within the enzyme active site that precede the dehalogenation step.

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