3WH3 image
Entry Detail
PDB ID:
3WH3
Keywords:
Title:
human Mincle, ligand free form
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2013-08-21
Release Date:
2013-10-23
Method Details:
Experimental Method:
Resolution:
1.32 Å
R-Value Free:
0.17
R-Value Work:
0.13
R-Value Observed:
0.13
Space Group:
P 31
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:C-type lectin domain family 4 member E
Mutations:I99K
Chain IDs:A
Chain Length:147
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Structural analysis for glycolipid recognition by the C-type lectins Mincle and MCL
Proc.Natl.Acad.Sci.USA 110 17438 17443 (2013)
PMID: 24101491 DOI: 10.1073/pnas.1312649110

Abstact

Mincle [macrophage inducible Ca(2+)-dependent (C-type) lectin; CLEC4E] and MCL (macrophage C-type lectin; CLEC4D) are receptors for the cord factor TDM (trehalose-6,6'-dimycolate), a unique glycolipid of mycobacterial cell-surface components, and activate immune cells to confer adjuvant activity. Although it is known that receptor-TDM interactions require both sugar and lipid moieties of TDM, the mechanisms of glycolipid recognition by Mincle and MCL remain unclear. We here report the crystal structures of Mincle, MCL, and the Mincle-citric acid complex. The structures revealed that these receptors are capable of interacting with sugar in a Ca(2+)-dependent manner, as observed in other C-type lectins. However, Mincle and MCL uniquely possess shallow hydrophobic regions found adjacent to their putative sugar binding sites, which reasonably locate for recognition of fatty acid moieties of glycolipids. Functional studies using mutant receptors as well as glycolipid ligands support this deduced binding mode. These results give insight into the molecular mechanism of glycolipid recognition through C-type lectin receptors, which may provide clues to rational design for effective adjuvants.

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