ISDA

Deposition Date 2012-10-17

Release Date 2012-12-26

Last Version Date 2023-11-08

Entry Detail

PDB ID:

3VZY

Keywords:

TRANSFERASE

Title:

Crystal structure of PcrB complexed with G1P from bacillus subtilis subap. subtilis str. 168

Biological Source:

Source Organism:

Bacillus subtilis (Taxon ID: 224308)

Host Organism:

Escherichia coli

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

1.63 Å

R-Value Free:

0.21

R-Value Work:

0.17

Space Group:

P 1 21 1

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Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Heptaprenylglyceryl phosphate synthase
Gene (Uniprot):pcrB
Chain IDs:A, B
Chain Length:228
Number of Molecules:2
Biological Source:Bacillus subtilis

UniProt ID:O34790 Pfam ID:PF01884

Ligand Molecules

1GP

Primary Citation

Insights into TIM-barrel prenyl transferase mechanisms: crystal structures of PcrB from Bacillus subtilis and Staphylococcus aureus

Ren, F, Feng, X, Ko, T.P, Huang, C.H, Hu, Y, Chan, H.C, Liu, Y.L, Wang, K, Chen, C.C, Pang, X, He, M, Li, Y, Oldfield, E, Guo, R.T.Show

Chembiochem 14 195 199 (2013)

PMID: 23322418 DOI: 10.1002/cbic.201200748

Abstact

Well structured: As a new triose phosphate isomerase (TIM) barrel-fold prenyl transferase, PcrB catalyzes the production of heptaprenylglyceryl phosphate from heptaprenyl diphosphate and glycerol-1-phosphate. Crystal structures of PcrB from Bacillus subtilis and Staphylococcus aureus in complex with ligands were solved, and together with site-directed mutagenesis and bioinformatics analyses, clearly reveal the catalytic mechanism of the enzyme.

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Primary Citation of related structures