ISDA

Deposition Date 2012-09-24

Release Date 2012-12-19

Last Version Date 2024-10-30

Entry Detail

PDB ID:

3VYD

Keywords:

HYDROLASE/HYDROLASE INHIBITOR

Title:

Human renin in complex with inhibitor 6

Biological Source:

Source Organism:

Homo sapiens (Taxon ID: 9606)

Host Organism:

Homo sapiens

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

2.81 Å

R-Value Free:

0.28

R-Value Work:

0.20

R-Value Observed:

0.21

Space Group:

P 21 3

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Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Renin
Gene (Uniprot):REN
Chain IDs:A, B
Chain Length:340
Number of Molecules:2
Biological Source:Homo sapiens

UniProt ID:P00797 Pfam ID:PF00026 EC:3.4.23.15

Modified Residue

Compound ID	Chain ID	Parent Comp ID	Details	2D Image
ASN	A	ASN	GLYCOSYLATION SITE

Ligand Molecules

NAG

VYD

Primary Citation

Design and discovery of new (3S,5R)-5-[4-(2-chlorophenyl)-2,2-dimethyl-5-oxopiperazin-1-yl]piperidine-3-carboxamides as potent renin inhibitors

Mori, Y, Ogawa, Y, Mochizuki, A, Nakamura, Y, Sugita, C, Miyazaki, S, Tamaki, K, Matsui, Y, Takahashi, M, Nagayama, T, Nagai, Y, Inoue, S, Nishi, T.Show

Bioorg.Med.Chem.Lett. 22 7677 7682 (2012)

PMID: 23122821 DOI: 10.1016/j.bmcl.2012.09.103

Abstact

Utilizing X-ray crystal structure analysis, (3S,5R)-5-[4-(2-chlorophenyl)-2,2-dimethyl-5-oxopiperazin-1-yl]piperidine-3-carboxamides were designed and identified as renin inhibitors. The most potent compound 15 demonstrated favorable pharmacokinetic and pharmacodynamic profiles in rat.

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Protein

Chemical

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Primary Citation of related structures