3VVC image
Deposition Date 2012-07-18
Release Date 2013-06-12
Last Version Date 2024-03-20
Entry Detail
PDB ID:
3VVC
Keywords:
Title:
Crystal Structure of Capsular Polysaccharide Synthesizing Enzyme CapE , K126E, in apo form
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.20 Å
R-Value Free:
0.26
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
H 3 2
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Capsular polysaccharide synthesis enzyme Cap8E
Mutagens:K126E
Chain IDs:A
Chain Length:363
Number of Molecules:1
Biological Source:Staphylococcus aureus
Primary Citation
Crystal structure of the capsular polysaccharide synthesizing protein CapE of Staphylococcus aureus.
Biosci.Rep. 33 463 474 (2013)
PMID: 23611437 DOI: 10.1042/BSR20130017

Abstact

Enzymes synthesizing the bacterial CP (capsular polysaccharide) are attractive antimicrobial targets. However, we lack critical information about the structure and mechanism of many of them. In an effort to reduce that gap, we have determined three different crystal structures of the enzyme CapE of the human pathogen Staphylococcus aureus. The structure reveals that CapE is a member of the SDR (short-chain dehydrogenase/reductase) super-family of proteins. CapE assembles in a hexameric complex stabilized by three major contact surfaces between protein subunits. Turnover of substrate and/or coenzyme induces major conformational changes at the contact interface between protein subunits, and a displacement of the substrate-binding domain with respect to the Rossmann domain. A novel dynamic element that we called the latch is essential for remodelling of the protein-protein interface. Structural and primary sequence alignment identifies a group of SDR proteins involved in polysaccharide synthesis that share the two salient features of CapE: the mobile loop (latch) and a distinctive catalytic site (MxxxK). The relevance of these structural elements was evaluated by site-directed mutagenesis.

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Primary Citation of related structures
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