3VUX image
Entry Detail
PDB ID:
3VUX
Title:
Crystal structure of A20 ZF7 in complex with linear ubiquitin, form II
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2012-07-09
Release Date:
2013-02-13
Method Details:
Experimental Method:
Resolution:
1.70 Å
R-Value Free:
0.20
R-Value Work:
0.16
R-Value Observed:
0.16
Space Group:
P 31
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Polyubiquitin-C
Chain IDs:A, B, C
Chain Length:76
Number of Molecules:3
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:Tumor necrosis factor alpha-induced protein 3
Chain IDs:D (auth: E), E (auth: F), F (auth: G)
Chain Length:35
Number of Molecules:3
Biological Source:Homo sapiens
Primary Citation
Specific recognition of linear polyubiquitin by A20 zinc finger 7 is involved in NF-kappaB regulation
Embo J. 31 3856 3870 (2012)
PMID: 23032187 DOI: 10.1038/emboj.2012.241

Abstact

LUBAC (linear ubiquitin chain assembly complex) activates the canonical NF-κB pathway through linear polyubiquitination of NEMO (NF-κB essential modulator, also known as IKKγ) and RIP1. However, the regulatory mechanism of LUBAC-mediated NF-κB activation remains elusive. Here, we show that A20 suppresses LUBAC-mediated NF-κB activation by binding linear polyubiquitin via the C-terminal seventh zinc finger (ZF7), whereas CYLD suppresses it through deubiquitinase (DUB) activity. We determined the crystal structures of A20 ZF7 in complex with linear diubiquitin at 1.70-1.98 Å resolutions. The crystal structures revealed that A20 ZF7 simultaneously recognizes the Met1-linked proximal and distal ubiquitins, and that genetic mutations associated with B cell lymphomas map to the ubiquitin-binding sites. Our functional analysis indicated that the binding of A20 ZF7 to linear polyubiquitin contributes to the recruitment of A20 into a TNF receptor (TNFR) signalling complex containing LUBAC and IκB kinase (IKK), which results in NF-κB suppression. These findings provide new insight into the regulation of immune and inflammatory responses.

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