3VSR image
Deposition Date 2012-05-08
Release Date 2012-08-22
Last Version Date 2024-10-30
Entry Detail
PDB ID:
3VSR
Keywords:
Title:
Microbacterium saccharophilum K-1 beta-fructofuranosidase catalytic domain
Biological Source:
Source Organism:
Arthrobacter (Taxon ID: 160970)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.00 Å
R-Value Free:
0.24
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Beta-fructofuranosidase
Gene (Uniprot):bff
Chain IDs:A
Chain Length:496
Number of Molecules:1
Biological Source:Arthrobacter
Primary Citation
Crystal structure of a lactosucrose-producing enzyme, Arthrobacter sp. K-1 beta-fructofuranosidase
Enzyme.Microb.Technol. 51 359 365 (2012)
PMID: 23040392 DOI: 10.1016/j.enzmictec.2012.08.004

Abstact

Arthrobacter sp. K-1 β-fructofuranosidase (ArFFase), a glycoside hydrolase family 68 enzyme, catalyzes the hydrolysis and transfructosylation of sucrose. ArFFase is useful for producing a sweetener, lactosucrose (4(G)-β-D-galactosylsucrose). The primary structure of ArFFase is homologous to those of levansucrases, although ArFFase catalyzes mostly hydrolysis when incubated with sucrose alone, even at high concentration. Here, we determined the crystal structure of ArFFase in unliganded form and complexed with fructose. ArFFase consisted of a five-bladed β-propeller fold as observed in levansucrases. The structure of ArFFase was most similar to that of Gluconacetobacter diazotrophicus levansucrase (GdLev). The structure of the catalytic cleft of ArFFase was also highly homologous to that of GdLev. However, two amino acid residues, Tyr232 and Pro442 in ArFFase, were not conserved between them. A tunnel observed at the bottom of the catalytic cleft of ArFFase may serve as a water drain or its reservoir.

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Primary Citation of related structures