3VRE image
Entry Detail
PDB ID:
3VRE
Title:
The crystal structure of hemoglobin from woolly mammoth in the deoxy form
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2012-04-09
Release Date:
2012-11-07
Method Details:
Experimental Method:
Resolution:
2.20 Å
R-Value Free:
0.26
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
P 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Hemoglobin subunit alpha
Chain IDs:A, C
Chain Length:141
Number of Molecules:2
Biological Source:Mammuthus primigenius
Polymer Type:polypeptide(L)
Description:Hemoglobin subunit beta/delta hybrid
Chain IDs:B, D
Chain Length:146
Number of Molecules:2
Biological Source:Mammuthus primigenius
Ligand Molecules
Primary Citation
Structures of haemoglobin from woolly mammoth in liganded and unliganded states.
Acta Crystallogr.,Sect.D 68 1441 1449 (2012)
PMID: 23090393 DOI: 10.1107/S0907444912029459

Abstact

The haemoglobin (Hb) of the extinct woolly mammoth has been recreated using recombinant genes expressed in Escherichia coli. The globin gene sequences were previously determined using DNA recovered from frozen cadavers. Although highly similar to the Hb of existing elephants, the woolly mammoth protein shows rather different responses to chloride ions and temperature. In particular, the heat of oxygenation is found to be much lower in mammoth Hb, which appears to be an adaptation to the harsh high-latitude climates of the Pleistocene Ice Ages and has been linked to heightened sensitivity of the mammoth protein to protons, chloride ions and organic phosphates relative to that of Asian elephants. To elucidate the structural basis for the altered homotropic and heterotropic effects, the crystal structures of mammoth Hb have been determined in the deoxy, carbonmonoxy and aquo-met forms. These models, which are the first structures of Hb from an extinct species, show many features reminiscent of human Hb, but underline how the delicate control of oxygen affinity relies on much more than simple overall quaternary-structure changes.

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Primary Citation of related structures