3VOU image
Deposition Date 2012-02-10
Release Date 2012-05-02
Last Version Date 2023-11-08
Entry Detail
PDB ID:
3VOU
Title:
The crystal structure of NaK-NavSulP chimera channel
Biological Source:
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.20 Å
R-Value Free:
0.32
R-Value Work:
0.29
R-Value Observed:
0.29
Space Group:
P 31 2 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Ion transport 2 domain protein, Voltage-gated sodium channel
Gene (Uniprot):BcerKBAB4_0590
Mutagens:M5I, K110N
Chain IDs:A, B
Chain Length:148
Number of Molecules:2
Biological Source:Bacillus weihenstephanensis, Sulfitobacter sp. NAS-14.1
Primary Citation
The C-terminal helical bundle of the tetrameric prokaryotic sodium channel accelerates the inactivation rate
Nat Commun 3 793 793 (2012)
PMID: 22531178 DOI: 10.1038/ncomms1797

Abstact

Most tetrameric channels have cytosolic domains to regulate their functions, including channel inactivation. Here we show that the cytosolic C-terminal region of NavSulP, a prokaryotic voltage-gated sodium channel cloned from Sulfitobacter pontiacus, accelerates channel inactivation. The crystal structure of the C-terminal region of NavSulP grafted into the C-terminus of a NaK channel revealed that the NavSulP C-terminal region forms a four-helix bundle. Point mutations of the residues involved in the intersubunit interactions of the four-helix bundle destabilized the tetramer of the channel and reduced the inactivation rate. The four-helix bundle was directly connected to the inner helix of the pore domain, and a mutation increasing the rigidity of the inner helix also reduced the inactivation rate. These findings suggest that the NavSulP four-helix bundle has important roles not only in stabilizing the tetramer, but also in accelerating the inactivation rate, through promotion of the conformational change of the inner helix.

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