3VKO image
Deposition Date 2011-11-18
Release Date 2012-09-12
Last Version Date 2023-11-08
Entry Detail
PDB ID:
3VKO
Title:
Galectin-8 N-terminal domain in complex with sialyllactosamine
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.08 Å
R-Value Free:
0.24
R-Value Work:
0.21
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Galectin-8
Gene (Uniprot):LGALS8
Chain IDs:A, B
Chain Length:153
Number of Molecules:2
Biological Source:Homo sapiens
Ligand Molecules
Peptide-like Molecules
PRD_900067
Primary Citation
X-ray structure of a protease-resistant mutant form of human galectin-8 with two carbohydrate recognition domains
Febs J. 279 3937 3951 (2012)
PMID: 22913484 DOI: 10.1111/j.1742-4658.2012.08753.x

Abstact

Galectin-8 is a tandem-repeat-type β-galactoside-specific animal lectin possessing N-terminal and C-terminal carbohydrate recognition domains (N-CRD and C-CRD, respectively), with a difference in carbohydrate-binding specificity, involved in cell-matrix interaction, malignant transformation, and cell adhesion. N-CRD shows strong affinity for α2-3-sialylated oligosaccharides, a feature unique to galectin-8. C-CRD usually shows lower affinity for oligosaccharides but higher affinity for N-glycan-type branched oligosaccharides than does N-CRD. There have been many structural studies on galectins with a single carbohydrate recognition domain (CRD), but no X-ray structure of a galectin containing both CRDs has been reported. Here, the X-ray structure of a protease-resistant mutant form of human galectin-8 possessing both CRDs and the novel pseudodimer structure of galectin-8 N-CRD in complexes with α2-3-sialylated oligosaccharide ligands were determined. The results revealed a difference in specificity between N-CRD and C-CRD, and provided new insights into the association of CRDs and/or molecules of galectin-8.

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Primary Citation of related structures