3VJQ image
Deposition Date 2011-10-27
Release Date 2012-05-16
Last Version Date 2024-11-20
Entry Detail
PDB ID:
3VJQ
Keywords:
Title:
Recombinant thaumatin at pH 8.0 with hydrogen atoms
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.00 Å
R-Value Free:
0.15
R-Value Work:
0.11
R-Value Observed:
0.12
Space Group:
P 21 21 21
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Thaumatin I
Chain IDs:A
Chain Length:207
Number of Molecules:1
Biological Source:Thaumatococcus daniellii
Ligand Molecules
Primary Citation
Atomic structure of the sweet-tasting protein thaumatin I at pH 8.0 reveals the large disulfide-rich region in domain II to be sensitive to a pH change
Biochem.Biophys.Res.Commun. 419 72 76 (2012)
PMID: 22326916 DOI: 10.1016/j.bbrc.2012.01.129

Abstact

Thaumatin, an intensely sweet-tasting plant protein, elicits a sweet taste at 50 nM. Although the sweetness remains when thaumatin is heated at 80 °C for 4h under acid conditions, it rapidly declines when heating at a pH above 6.5. To clarify the structural difference at high pH, the atomic structure of a recombinant thaumatin I at pH 8.0 was determined at a resolution of 1.0Å. Comparison to the crystal structure of thaumatin at pH 7.3 and 7.0 revealed the root-mean square deviation value of a Cα atom to be substantially greater in the large disulfide-rich region of domain II, especially residues 154-164, suggesting that a loop region in domain II to be affected by solvent conditions. Furthermore, B-factors of Lys137, Lys163, and Lys187 were significantly affected by pH change, suggesting that a striking increase in the mobility of these lysine residues, which could facilitate a reaction with a free sulfhydryl residue produced via the β-elimination of disulfide bonds by heating at a pH above 7.0. The increase in mobility of lysine residues as well as a loop region in domain II might play an important role in the heat-induced aggregation of thaumatin above pH 7.0.

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Primary Citation of related structures