ISDA

Deposition Date 2012-01-05

Release Date 2013-01-09

Last Version Date 2024-02-28

Entry Detail

PDB ID:

3VDN

Keywords:

TRANSFERASE

Title:

Crystal Structure of VldE, the pseudo-glycosyltransferase, in complex with GDP

Biological Source:

Source Organism:

Streptomyces hygroscopicus subsp. limoneus (Taxon ID: 264445)

Host Organism:

Escherichia coli

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

2.55 Å

R-Value Free:

0.28

R-Value Work:

0.24

R-Value Observed:

0.24

Space Group:

P 21 21 2

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Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Molecule:VldE
Gene (Uniprot):vldE
Chain IDs:A (auth: B)
Chain Length:497
Number of Molecules:1
Biological Source:Streptomyces hygroscopicus subsp. limoneus

UniProt ID:Q15JG1 Pfam ID:PF00982 EC:2.4.1.338

Ligand Molecules

GDP

Primary Citation

Crystal Structure of the VldE, the pseudo-glycosyltransferase, which catalyzes non-glycosidic C-N coupling in Validamycin A biosynthesis

Cavalier, M.C, Yim, Y.-S, Asamizu, S, Neau, D, Mahmud, T, Lee, Y.-H.Show

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Primary Citation of related structures