3V8Z image
Deposition Date 2011-12-23
Release Date 2012-01-25
Last Version Date 2024-02-28
Entry Detail
PDB ID:
3V8Z
Keywords:
Title:
Structure of apo-glycogenin truncated at residue 270 complexed with UDP
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.20 Å
R-Value Free:
0.23
R-Value Work:
0.19
R-Value Observed:
0.20
Space Group:
I 2 2 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Glycogenin-1
Gene (Uniprot):GYG1
Chain IDs:A
Chain Length:291
Number of Molecules:1
Biological Source:Oryctolagus cuniculus
Primary Citation
Structural and biochemical insight into glycogenin inactivation by the glycogenosis-causing T82M mutation.
Febs Lett. 586 254 257 (2012)
PMID: 22226635 DOI: 10.1016/j.febslet.2011.12.028

Abstact

The X-ray structure of rabbit glycogenin containing the T82M (T83M according to previous authors amino acid numbering) mutation causing glycogenosis showed the loss of Thr82 hydrogen bond to Asp162, the residue involved in the activation step of the glucose transfer reaction mechanism. Autoglucosylation, maltoside transglucosylation and UDP-glucose hydrolyzing activities were abolished even though affinity and interactions with UDP-glucose and positioning of Tyr194 acceptor were conserved. Substitution of Thr82 for serine but not for valine restored the maximum extent of autoglucosylation as well as transglucosylation and UDP-glucose hydrolysis rate. Results provided evidence sustaining the essential role of the lost single hydrogen bond for UDP-glucose activation leading to glycogenin-bound glycogen primer synthesis.

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Primary Citation of related structures