3V44 image
Deposition Date 2011-12-14
Release Date 2012-02-29
Last Version Date 2024-10-16
Entry Detail
PDB ID:
3V44
Keywords:
Title:
Crystal structure of the N-terminal fragment of zebrafish TLR5
Biological Source:
Source Organism:
Danio rerio (Taxon ID: 7955)
Eptatretus burgeri (Taxon ID: 7764)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.83 Å
R-Value Free:
0.23
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
P 43 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Toll-like receptor 5b and variable lymphocyte receptor B.61 chimeric protein
Gene (Uniprot):tlr5b, VLRB
Mutations:V24E, L124V, Q159K, R227K, S229T, D334N
Chain IDs:A
Chain Length:407
Number of Molecules:1
Biological Source:Danio rerio, Eptatretus burgeri
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
ASN A ASN GLYCOSYLATION SITE
Ligand Molecules
Primary Citation
Structural basis of TLR5-flagellin recognition and signaling.
Science 335 859 864 (2012)
PMID: 22344444 DOI: 10.1126/science.1215584

Abstact

Toll-like receptor 5 (TLR5) binding to bacterial flagellin activates signaling through the transcription factor NF-κB and triggers an innate immune response to the invading pathogen. To elucidate the structural basis and mechanistic implications of TLR5-flagellin recognition, we determined the crystal structure of zebrafish TLR5 (as a variable lymphocyte receptor hybrid protein) in complex with the D1/D2/D3 fragment of Salmonella flagellin, FliC, at 2.47 angstrom resolution. TLR5 interacts primarily with the three helices of the FliC D1 domain using its lateral side. Two TLR5-FliC 1:1 heterodimers assemble into a 2:2 tail-to-tail signaling complex that is stabilized by quaternary contacts of the FliC D1 domain with the convex surface of the opposing TLR5. The proposed signaling mechanism is supported by structure-guided mutagenesis and deletion analyses on CBLB502, a therapeutic protein derived from FliC.

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Primary Citation of related structures