3UXU image
Deposition Date 2011-12-05
Release Date 2012-05-16
Last Version Date 2024-10-16
Entry Detail
PDB ID:
3UXU
Keywords:
Title:
The structure of the catalytic domain of the Sulfolobus Spindle-shaped viral integrase reveals an evolutionarily conserved catalytic core and supports a mechanism of DNA cleavage in trans
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.71 Å
R-Value Free:
0.21
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 65 2 2
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Probable integrase
Gene (Uniprot):d335
Mutagens:V215I, T307A
Chain IDs:A
Chain Length:169
Number of Molecules:1
Biological Source:Sulfolobus virus 1
Ligand Molecules
Primary Citation
The Structure of an Archaeal Viral Integrase Reveals an Evolutionarily Conserved Catalytic Core yet Supports a Mechanism of DNA Cleavage in trans.
J.Virol. 86 8309 8313 (2012)
PMID: 22593158 DOI: 10.1128/JVI.00547-12

Abstact

The first structure of a catalytic domain from a hyperthermophilic archaeal viral integrase reveals a minimal fold similar to that of bacterial HP1 integrase and defines structural elements conserved across three domains of life. However, structural superposition on bacterial Holliday junction complexes and similarities in the C-terminal tail with that of eukaryotic Flp suggest that the catalytic tyrosine and an additional active-site lysine are delivered to neighboring subunits in trans. An intramolecular disulfide bond contributes significant thermostability in vitro.

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Protein

Chemical

Disease

Primary Citation of related structures
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