3UXF image
Deposition Date 2011-12-05
Release Date 2012-11-28
Last Version Date 2024-11-06
Entry Detail
PDB ID:
3UXF
Keywords:
Title:
Structure of the fimbrial protein FimP from Actonomyces oris
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.60 Å
R-Value Free:
0.19
R-Value Work:
0.16
R-Value Observed:
0.17
Space Group:
P 21 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Fimbrial subunit type 1
Mutations:V360I
Chain IDs:A
Chain Length:488
Number of Molecules:1
Biological Source:Actinomyces oris
Ligand Molecules
Primary Citation
The Pilin Protein FimP from Actinomyces oris: Crystal Structure and Sequence Analyses.
Plos One 7 e48364 e48364 (2012)
PMID: 23118994 DOI: 10.1371/journal.pone.0048364

Abstact

The Actinomyces oris type-1 pili are important for the initial formation of dental plaque by binding to salivary proteins that adhere to the tooth surface. Here we present the X-ray structure of FimP, the protein that is polymerized into the type-1 pilus stalk, assisted by a pili-specific sortase. FimP consists of three tandem IgG-like domains. The middle and C-terminal domains contain one autocatalyzed intramolecular isopeptide bond each, a feature used by Gram-positive bacteria for stabilization of surface proteins. While the N-terminal domain harbours all the residues necessary for forming an isopeptide bond, no such bond is observed in the crystal structure of this unpolymerized form of FimP. The monomer is further stabilized by one disulfide bond each in the N- and C-terminal domains as well as by a metal-coordinated loop protruding from the C-terminal domain. A lysine, predicted to be crucial for FimP polymerization by covalent attachment to a threonine from another subunit, is located at the rim of a groove lined with conserved residues. The groove may function as a docking site for the sortase-FimP complex. We also present sequence analyses performed on the genes encoding FimP as well as the related FimA, obtained from clinical isolates.

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