ISDA

Deposition Date 2011-11-03

Release Date 2012-02-01

Last Version Date 2023-09-13

Entry Detail

PDB ID:

3UHM

Keywords:

Hydrolase/Hydrolase inhibitor

Title:

UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase in complex with inhibitor

Biological Source:

Source Organism:

Pseudomonas aeruginosa (Taxon ID: 287)

Host Organism:

Escherichia coli

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

1.26 Å

R-Value Free:

0.20

R-Value Work:

0.17

R-Value Observed:

0.18

Space Group:

P 1 21 1

Download Validation Report

Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Molecule:UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase
Gene (Uniprot):lpxC
Mutations:C40S
Chain IDs:A
Chain Length:299
Number of Molecules:1
Biological Source:Pseudomonas aeruginosa

UniProt ID:P47205 Pfam ID:PF03331 EC:3.5.1.108

Ligand Molecules

EDO

GAI

RFN

Primary Citation

Pyridone methylsulfone hydroxamate LpxC inhibitors for the treatment of serious gram-negative infections.

Montgomery, J.I, Brown, M.F, Reilly, U, Price, L.M, Abramite, J.A, Arcari, J, Barham, R, Che, Y, Chen, J.M, Chung, S.W, Collantes, E.M, Desbonnet, C, Doroski, M, Doty, J, Engtrakul, J.J, Harris, T.M, Huband, M, Knafels, J.D, Leach, K.L, Liu, S, Marfat, A, McAllister, L, McElroy, E, Menard, C.A, Mitton-Fry, M, Mullins, L, Noe, M.C, O'Donnell, J, Oliver, R, Penzien, J, Plummer, M, Shanmugasundaram, V, Thoma, C, Tomaras, A.P, Uccello, D.P, Vaz, A, Wishka, D.G.Show

J.Med.Chem. 55 1662 1670 (2012)

PMID: 22257165 DOI: 10.1021/jm2014875

Abstact

The synthesis and biological activity of a new series of LpxC inhibitors represented by pyridone methylsulfone hydroxamate 2a is presented. Members of this series have improved solubility and free fraction when compared to compounds in the previously described biphenyl methylsulfone hydroxamate series, and they maintain superior Gram-negative antibacterial activity to comparator agents.

Legend

Protein

Chemical

Disease

Primary Citation of related structures