3U4L image
Deposition Date 2011-10-09
Release Date 2012-04-25
Last Version Date 2024-10-16
Entry Detail
PDB ID:
3U4L
Title:
Cryocooled bovine profilin:actin crystal structure to 2.4 A
Biological Source:
Source Organism:
Bos taurus (Taxon ID: 9913)
Method Details:
Experimental Method:
Resolution:
2.40 Å
R-Value Free:
0.33
R-Value Work:
0.24
R-Value Observed:
0.24
Space Group:
P 21 21 21
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Actin, cytoplasmic 1
Gene (Uniprot):ACTB
Chain IDs:A
Chain Length:375
Number of Molecules:1
Biological Source:Bos taurus
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Profilin-1
Gene (Uniprot):PFN1
Chain IDs:B (auth: P)
Chain Length:140
Number of Molecules:1
Biological Source:Bos taurus
Primary Citation
Structural basis for profilin-mediated actin nucleotide exchange.
J.Mol.Biol. 418 103 116 (2012)
PMID: 22366544 DOI: 10.1016/j.jmb.2012.02.012

Abstact

Actin is a ubiquitous eukaryotic protein that is responsible for cellular scaffolding, motility, and division. The ability of actin to form a helical filament is the driving force behind these cellular activities. Formation of a filament depends on the successful exchange of actin's ADP for ATP. Mammalian profilin is a small actin binding protein that catalyzes the exchange of nucleotide and facilitates the addition of an actin monomer to a growing filament. Here, crystal structures of profilin-actin have been determined to show an actively exchanging ATP. Structural analysis shows how the binding of profilin to the barbed end of actin causes a rotation of the small domain relative to the large domain. This conformational change is propagated to the ATP site and causes a shift in nucleotide loops, which in turn causes a repositioning of Ca(2+) to its canonical position as the cleft closes around ATP. Reversal of the solvent exposure of Trp356 is also involved in cleft closure. In addition, secondary calcium binding sites were identified.

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Primary Citation of related structures