3TXS image
Deposition Date 2011-09-23
Release Date 2011-12-28
Last Version Date 2023-09-13
Entry Detail
PDB ID:
3TXS
Keywords:
Title:
Crystal Structure of phage 44RR small terminase gp16
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.81 Å
R-Value Free:
0.21
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
H 3
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Terminase DNA packaging enzyme small subunit
Gene (Uniprot):16
Chain IDs:A, B, C, D
Chain Length:94
Number of Molecules:4
Biological Source:Aeromonas phage 44RR2.8t
Primary Citation
Structure and function of the small terminase component of the DNA packaging machine in T4-like bacteriophages.
Proc.Natl.Acad.Sci.USA 109 817 822 (2012)
PMID: 22207623 DOI: 10.1073/pnas.1110224109

Abstact

Tailed DNA bacteriophages assemble empty procapsids that are subsequently filled with the viral genome by means of a DNA packaging machine situated at a special fivefold vertex. The packaging machine consists of a "small terminase" and a "large terminase" component. One of the functions of the small terminase is to initiate packaging of the viral genome, whereas the large terminase is responsible for the ATP-powered translocation of DNA. The small terminase subunit has three domains, an N-terminal DNA-binding domain, a central oligomerization domain, and a C-terminal domain for interacting with the large terminase. Here we report structures of the central domain in two different oligomerization states for a small terminase from the T4 family of phages. In addition, we report biochemical studies that establish the function for each of the small terminase domains. On the basis of the structural and biochemical information, we propose a model for DNA packaging initiation.

Legend

Protein

Chemical

Disease

Primary Citation of related structures