3TRV image
Deposition Date 2011-09-11
Release Date 2012-01-25
Last Version Date 2024-10-30
Entry Detail
PDB ID:
3TRV
Title:
Crystal structure of quasiracemic villin headpiece subdomain containing (F5Phe17) substitution
Biological Source:
Source Organism:
Gallus gallus (Taxon ID: 9031)
Method Details:
Experimental Method:
Resolution:
1.00 Å
R-Value Free:
0.15
R-Value Work:
0.13
R-Value Observed:
0.13
Space Group:
P 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:L-Villin-1
Gene (Uniprot):VIL1
Mutagens:N818H
Chain IDs:A
Chain Length:35
Number of Molecules:1
Biological Source:Gallus gallus
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(D)
Molecule:D-Villin-1
Gene (Uniprot):VIL1
Mutagens:N818H
Chain IDs:B
Chain Length:35
Number of Molecules:1
Biological Source:Gallus gallus
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
PF5 A PHE 2,3,4,5,6-PENTAFLUORO-L-PHENYLALANINE
Primary Citation
Quasiracemic crystallization as a tool to assess the accommodation of noncanonical residues in nativelike protein conformations.
J.Am.Chem.Soc. 134 2473 2476 (2012)
PMID: 22280019 DOI: 10.1021/ja210045s

Abstact

Quasiracemic crystallization has been used to obtain high-resolution structures of two variants of the villin headpiece subdomain (VHP) that contain a pentafluorophenylalanine (F(5)Phe) residue in the hydrophobic core. In each case, the crystal contained the variant constructed from l-amino acids and the native sequence constructed from d-amino acids. We were motivated to undertake these studies by reports that racemic proteins crystallize more readily than homochiral forms and the prospect that quasiracemic crystallization would enable us to determine whether a polypeptide containing a noncanonical residue can closely mimic the tertiary structure of the native sequence. The results suggest that quasiracemic crystallization may prove to be generally useful for assessing mimicry of naturally evolved protein folding patterns by polypeptides that contain unnatural side-chain or backbone subunits.

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Primary Citation of related structures
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