3TM7 image
Deposition Date 2011-08-31
Release Date 2012-04-11
Last Version Date 2024-02-28
Entry Detail
PDB ID:
3TM7
Keywords:
Title:
Processed Aspartate Decarboxylase Mutant with Asn72 mutated to Ala
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.70 Å
R-Value Free:
0.18
R-Value Work:
0.16
R-Value Observed:
0.16
Space Group:
P 61 2 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Aspartate 1-decarboxylase beta chain
Gene (Uniprot):panD
Chain IDs:A, C
Chain Length:26
Number of Molecules:2
Biological Source:Escherichia coli
Polymer Type:polypeptide(L)
Molecule:Aspartate 1-decarboxylase alpha chain
Gene (Uniprot):panD
Mutations:N72A
Chain IDs:B, D
Chain Length:102
Number of Molecules:2
Biological Source:Escherichia coli
Ligand Molecules
Primary Citation
Structure of Escherichia coli aspartate alpha-decarboxylase Asn72Ala: probing the role of Asn72 in pyruvoyl cofactor formation
Acta Crystallogr.,Sect.F 68 414 417 (2012)
PMID: 22505409 DOI: 10.1107/S1744309112009487

Abstact

The crystal structure of the Asn72Ala site-directed mutant of Escherichia coli aspartate α-decarboxylase (ADC) has been determined at 1.7 Å resolution. The refined structure is consistent with the presence of a hydrolysis product serine in the active site in place of the pyruvoyl group required for catalysis, which suggests that the role of Asn72 is to protect the ester formed during ADC activation from hydrolysis. In previously determined structures of activated ADC, including the wild type and other site-directed mutants, the C-terminal region of the protein is disordered, but in the Asn72Ala mutant these residues are ordered owing to an interaction with the active site of the neighbouring symmetry-related multimer.

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Primary Citation of related structures