ISDA

Deposition Date 2011-08-10

Release Date 2011-10-12

Last Version Date 2023-09-13

Entry Detail

PDB ID:

3TDC

Keywords:

LIGASE/LIGASE INHIBITOR

Title:

Crystal Structure of Human Acetyl-CoA carboxylase 2

Biological Source:

Source Organism:

Homo sapiens (Taxon ID: 9606)

Host Organism:

Spodoptera frugiperda

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

2.41 Å

R-Value Free:

0.21

R-Value Work:

0.16

R-Value Observed:

0.17

Space Group:

C 2 2 21

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Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Acetyl-CoA carboxylase 2 variant
Chain IDs:A
Chain Length:762
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:O00763 Pfam ID:PF01039

Ligand Molecules

0EU

Primary Citation

Design, synthesis, and structure-activity relationships of spirolactones bearing 2-ureidobenzothiophene as acetyl-CoA carboxylases inhibitors.

Yamashita, T, Kamata, M, Endo, S, Yamamoto, M, Kakegawa, K, Watanabe, H, Miwa, K, Yamano, T, Funata, M, Sakamoto, J, Tani, A, Mol, C.D, Zou, H, Dougan, D.R, Sang, B, Snell, G, Fukatsu, K.Show

Bioorg.Med.Chem.Lett. 21 6314 6318 (2011)

PMID: 21944854 DOI: 10.1016/j.bmcl.2011.08.117

Abstact

The co-crystal structure of the human acetyl-coenzyme A 2 (ACC2) carboxyl transferase domain and the reported compound CP-640186 (1b) suggested that two carbonyl groups are essential for potent ACC2 inhibition. By focusing on enhancing the interactions between the two carbonyl groups and the amino acid residues Gly(2162) and Glu(2230), we used ligand- and structure-based drug design to discover spirolactones bearing a 2-ureidobenzothiophene moiety.

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Primary Citation of related structures