3STZ image
Entry Detail
PDB ID:
3STZ
Title:
KcsA potassium channel mutant Y82C with nitroxide spin label
Biological Source:
Host Organism:
PDB Version:
Deposition Date:
2011-07-11
Release Date:
2012-04-18
Method Details:
Experimental Method:
Resolution:
2.50 Å
R-Value Free:
0.28
R-Value Work:
0.24
Space Group:
I 4
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:antibody Fab fragment heavy chain
Chain IDs:A
Chain Length:219
Number of Molecules:1
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:antibody Fab fragment light chain
Chain IDs:B
Chain Length:212
Number of Molecules:1
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:Voltage-gated potassium channel
Mutations:Y82C
Chain IDs:C
Chain Length:102
Number of Molecules:1
Biological Source:Streptomyces lividans
Primary Citation
Mechanism of Cd(2+) Coordination during Slow Inactivation in Potassium Channels.
Structure 20 1332 1342 (2012)
PMID: 22771214 DOI: 10.1016/j.str.2012.03.027

Abstact

In K+ channels, rearrangements of the pore outer vestibule have been associated with C-type inactivation gating. Paradoxically, the crystal structure of Open/C-type inactivated KcsA suggests these movements to be modest in magnitude. In this study, we show that under physiological conditions, the KcsA outer vestibule undergoes relatively large dynamic rearrangements upon inactivation. External Cd2+ enhances the rate of C-type inactivation in an cysteine mutant (Y82C) via metal-bridge formation. This effect is not present in a non-inactivating mutant (E71A/Y82C). Tandem dimer and tandem tetramer constructs of equivalent cysteine mutants in KcsA and Shaker K+ channels demonstrate that these Cd2+ metal bridges are formed only between adjacent subunits. This is well supported by molecular dynamics simulations. Based on the crystal structure of Cd2+ -bound Y82C-KcsA in the closed state, together with electron paramagnetic resonance distance measurements in the KcsA outer vestibule, we suggest that subunits must dynamically come in close proximity as the channels undergo inactivation.

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Primary Citation of related structures