3SRP image
Deposition Date 2011-07-07
Release Date 2011-08-03
Last Version Date 2023-09-13
Entry Detail
PDB ID:
3SRP
Keywords:
Title:
Structure of Rivax: A Human Ricin Vaccine
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.14 Å
R-Value Free:
0.25
R-Value Work:
0.21
R-Value Observed:
0.21
Space Group:
P 41 21 2
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Ricin A chain
Mutagens:V76M, Y80A
Chain IDs:A
Chain Length:268
Number of Molecules:1
Biological Source:Ricinus communis
Ligand Molecules
Primary Citation
Structure of RiVax: a recombinant ricin vaccine.
Acta Crystallogr.,Sect.D 67 826 830 (2011)
PMID: 21904036 DOI: 10.1107/S0907444911026771

Abstact

RiVax is a recombinant protein that is currently under clinical development as part of a human vaccine to protect against ricin poisoning. RiVax includes ricin A-chain (RTA) residues 1-267 with two intentional amino-acid substitutions, V76M and Y80A, aimed at reducing toxicity. Here, the crystal structure of RiVax was solved to 2.1 Å resolution and it was shown that it is superposable with that of the ricin toxin A-chain from Ricinus communis with a root-mean-square deviation of 0.6 Å over 258 C(α) atoms. The RiVax structure is also compared with the recently determined structure of another potential ricin-vaccine immunogen, RTA 1-33/44-198 R48C/T77C. Finally, the locations and solvent-exposure of two toxin-neutralizing B-cell epitopes were examined and it was found that these epitopes are within or near regions predicted to be involved in catalysis. The results demonstrate the composition of the RiVax clinical material and will guide ongoing protein-engineering strategies to develop improved immunogens.

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Primary Citation of related structures
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