3SIT image
Deposition Date 2011-06-20
Release Date 2011-09-28
Last Version Date 2023-09-13
Entry Detail
PDB ID:
3SIT
Title:
Crystal structure of porcine CRW-8 Rotavirus VP8* in complex with aceramido-GM3
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.80 Å
R-Value Free:
0.21
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Outer capsid protein VP4
Mutations:yes
Chain IDs:A, B
Chain Length:163
Number of Molecules:2
Biological Source:Porcine rotavirus
Peptide-like Molecules
PRD_900025
Primary Citation
Novel structural insights into rotavirus recognition of ganglioside glycan receptors.
J.Mol.Biol. 413 929 939 (2011)
PMID: 21945555 DOI: 10.1016/j.jmb.2011.09.005

Abstact

Rotaviruses ubiquitously infect children under the age of 5, being responsible for more than half a million diarrhoeal deaths each year worldwide. Host cell oligosaccharides containing sialic acid(s) are critical for attachment by rotaviruses. However, to date, no detailed three-dimensional atomic model showing the exact rotavirus interactions with these glycoconjugate receptors has been reported. Here, we present the first crystallographic structures of the rotavirus carbohydrate-recognizing protein VP8* in complex with ganglioside G(M3) glycans. In combination with assessment of the inhibition of rotavirus infectivity by N-acetyl and N-glycolyl forms of this ganglioside, our results reveal key details of rotavirus-ganglioside G(M3) glycan recognition. In addition, they show a direct correlation between the carbohydrate specificities exhibited by VP8* from porcine and by monkey rotaviruses and the respective infectious virus particles. These novel results also indicate the potential binding interactions of rotavirus VP8* with other sialic acid-containing gangliosides.

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Primary Citation of related structures