3SFK image
Deposition Date 2011-06-13
Release Date 2011-07-06
Last Version Date 2023-09-13
Entry Detail
PDB ID:
3SFK
Title:
Crystal structure of Plasmodium falciparum dihydroorotate dehydrogenase bound with Inhibitor DSM267
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.95 Å
R-Value Free:
0.28
R-Value Work:
0.22
R-Value Observed:
0.22
Space Group:
P 64
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Dihydroorotate dehydrogenase (quinone), mitochondrial
Gene (Uniprot):PFF0160c
Chain IDs:A
Chain Length:400
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Primary Citation
Structure-Guided Lead Optimization of Triazolopyrimidine-Ring Substituents Identifies Potent Plasmodium falciparum Dihydroorotate Dehydrogenase Inhibitors with Clinical Candidate Potential.
J.Med.Chem. 54 5540 5561 (2011)
PMID: 21696174 DOI: 10.1021/jm200592f

Abstact

Drug therapy is the mainstay of antimalarial therapy, yet current drugs are threatened by the development of resistance. In an effort to identify new potential antimalarials, we have undertaken a lead optimization program around our previously identified triazolopyrimidine-based series of Plasmodium falciparum dihydroorotate dehydrogenase (PfDHODH) inhibitors. The X-ray structure of PfDHODH was used to inform the medicinal chemistry program allowing the identification of a potent and selective inhibitor (DSM265) that acts through DHODH inhibition to kill both sensitive and drug resistant strains of the parasite. This compound has similar potency to chloroquine in the humanized SCID mouse P. falciparum model, can be synthesized by a simple route, and rodent pharmacokinetic studies demonstrated it has excellent oral bioavailability, a long half-life and low clearance. These studies have identified the first candidate in the triazolopyrimidine series to meet previously established progression criteria for efficacy and ADME properties, justifying further development of this compound toward clinical candidate status.

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Primary Citation of related structures