3SC0 image
Deposition Date 2011-06-06
Release Date 2011-06-22
Last Version Date 2023-09-13
Entry Detail
PDB ID:
3SC0
Keywords:
Title:
Crystal Structure of MMACHC (1-238), a human B12 processing enzyme, complexed with MethylCobalamin
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.95 Å
R-Value Free:
0.24
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
P 62 2 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Methylmalonic aciduria and homocystinuria type C protein
Gene (Uniprot):MMACHC
Chain IDs:A
Chain Length:241
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Structural basis of multifunctionality in a vitamin B12-processing enzyme.
J.Biol.Chem. 286 29780 29787 (2011)
PMID: 21697092 DOI: 10.1074/jbc.M111.261370

Abstact

An early step in the intracellular processing of vitamin B(12) involves CblC, which exhibits dual reactivity, catalyzing the reductive decyanation of cyanocobalamin (vitamin B(12)), and the dealkylation of alkylcobalamins (e.g. methylcobalamin; MeCbl). Insights into how the CblC scaffold supports this chemical dichotomy have been unavailable despite it being the most common locus of patient mutations associated with inherited cobalamin disorders that manifest in both severe homocystinuria and methylmalonic aciduria. Herein, we report structures of human CblC, with and without bound MeCbl, which provide novel biochemical insights into its mechanism of action. Our results reveal that CblC is the most divergent member of the NADPH-dependent flavin reductase family and can use FMN or FAD as a prosthetic group to catalyze reductive decyanation. Furthermore, CblC is the first example of an enzyme with glutathione transferase activity that has a sequence and structure unrelated to the GST superfamily. CblC thus represents an example of evolutionary adaptation of a common structural platform to perform diverse chemistries. The CblC structure allows us to rationalize the biochemical basis of a number of pathological mutations associated with severe clinical phenotypes.

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Primary Citation of related structures