3SBN image
Deposition Date 2011-06-06
Release Date 2011-12-28
Last Version Date 2023-11-15
Entry Detail
PDB ID:
3SBN
Keywords:
Title:
trichovirin I-4A in polar environment at 0.9 Angstroem
Biological Source:
Source Organism:
Hypocrea rufa (Taxon ID: 5547)
Method Details:
Experimental Method:
Resolution:
0.90 Å
R-Value Free:
0.12
R-Value Observed:
0.10
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Trichovirin I-4A
Chain IDs:A, B
Chain Length:15
Number of Molecules:2
Biological Source:Hypocrea rufa
Peptide-like Molecules
PRD_000828
Primary Citation
Four complete turns of a curved 310-helix at atomic resolution: The crystal structure of the peptaibol trichovirin I-4A in polar environment suggests a transition to alpha-helix for membrane function
Acta Crystallogr.,Sect.D 68 109 116 (2012)
PMID: 22281739 DOI: 10.1107/S090744491105133X

Abstact

The first crystal structure of a member of peptaibol antibiotic subfamily 4, trichovirin I-4A (14 residues), has been determined by direct methods and refined at atomic resolution. The monoclinic unit cell has two molecules in the asymmetric unit. Both molecules assume a 3₁₀ right-handed helical conformation and are significantly bent. The molecules pack loosely along the crystallographic twofold axis, forming two large tunnels between symmetry-related molecules in which no ordered solvent could be located. Carbonyl O atoms which are not involved in intramolecular hydrogen bonding participate in close van der Waals interactions with apolar groups. The necessary amphipathicity for biological activity of peptaibols is not realised in the crystal structure. Hence, a structural change of trichovirin to an α-helical conformation is proposed for membrane integration and efficient water/ion transportation across the lipid bilayer.

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