3S9S image
Deposition Date 2011-06-02
Release Date 2012-06-06
Last Version Date 2023-09-13
Entry Detail
PDB ID:
3S9S
Keywords:
TRANSCRIPTION
Title:
Ligand binding domain of PPARgamma complexed with a benzimidazole partial agonist
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Escherichia coli
Method Details:
Experimental Method:
X-RAY DIFFRACTION
Resolution:
2.55 Å
R-Value Free:
0.28
R-Value Work:
0.22
R-Value Observed:
0.22
Space Group:
C 2 2 21
3S9S validation report
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Peroxisome proliferator-activated receptor gamma
Gene (Uniprot):PPARG
Chain IDs:A
Chain Length:284
Number of Molecules:1
Biological Source:Homo sapiens
UniProt ID:P37231 Pfam ID:PF00104
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Nuclear receptor coactivator 1
Gene (Uniprot):NCOA1
Chain IDs:B
Chain Length:13
Number of Molecules:1
Biological Source:Homo sapiens
UniProt ID:Q15788 EC:2.3.1.48
Ligand Molecules
M0T
Primary Citation
Discovery of GSK1997132B a novel centrally penetrant benzimidazole PPARgamma partial agonist.
Bioorg.Med.Chem.Lett. 21 5568 5572 (2011)
PMID: 21798739 DOI: 10.1016/j.bmcl.2011.06.088

Abstact

The peroxisome proliferator-activated receptor γ (PPARγ) is a ligand-activated nuclear receptor, thought to play a role in energy metabolism, glucose homeostasis and microglia-mediated neuroinflammation. A novel benzimidazole series of centrally penetrant PPARγ partial agonists has been identified. The optimization of PPARγ activity and in vivo pharmacokinetics leading to the identification of GSK1997132B a potent, metabolically stable and centrally penetrant PPARγ partial agonist, is described.

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Primary Citation of related structures
3S9S