3S9D image
Deposition Date 2011-06-01
Release Date 2011-08-31
Last Version Date 2024-11-27
Entry Detail
PDB ID:
3S9D
Title:
binary complex between IFNa2 and IFNAR2
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.00 Å
R-Value Free:
0.23
R-Value Work:
0.20
Space Group:
P 1 21 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Interferon alpha-2
Gene (Uniprot):IFNA2
Mutagens:H57A, E58A, Q61A
Chain IDs:A, C
Chain Length:168
Number of Molecules:2
Biological Source:Homo sapiens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Interferon alpha/beta receptor 2
Gene (Uniprot):IFNAR2
Chain IDs:B, D
Chain Length:199
Number of Molecules:2
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Structural linkage between ligand discrimination and receptor activation by type I interferons.
Cell(Cambridge,Mass.) 146 621 632 (2011)
PMID: 21854986 DOI: 10.1016/j.cell.2011.06.048

Abstact

Type I Interferons (IFNs) are important cytokines for innate immunity against viruses and cancer. Sixteen human type I IFN variants signal through the same cell-surface receptors, IFNAR1 and IFNAR2, yet they can evoke markedly different physiological effects. The crystal structures of two human type I IFN ternary signaling complexes containing IFNα2 and IFNω reveal recognition modes and heterotrimeric architectures that are unique among the cytokine receptor superfamily but conserved between different type I IFNs. Receptor-ligand cross-reactivity is enabled by conserved receptor-ligand "anchor points" interspersed among ligand-specific interactions that "tune" the relative IFN-binding affinities, in an apparent extracellular "ligand proofreading" mechanism that modulates biological activity. Functional differences between IFNs are linked to their respective receptor recognition chemistries, in concert with a ligand-induced conformational change in IFNAR1, that collectively control signal initiation and complex stability, ultimately regulating differential STAT phosphorylation profiles, receptor internalization rates, and downstream gene expression patterns.

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Primary Citation of related structures