3S7E image
Deposition Date 2011-05-26
Release Date 2011-09-21
Last Version Date 2023-09-13
Entry Detail
PDB ID:
3S7E
Keywords:
Title:
Crystal structure of Ara h 1
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.71 Å
R-Value Free:
0.25
R-Value Work:
0.23
R-Value Observed:
0.23
Space Group:
H 3
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Allergen Ara h 1, clone P41B
Chain IDs:A, B
Chain Length:418
Number of Molecules:2
Biological Source:Arachis hypogaea
Ligand Molecules
Primary Citation
Structural and Immunologic Characterization of Ara h 1, a Major Peanut Allergen.
J.Biol.Chem. 286 39318 39327 (2011)
PMID: 21917921 DOI: 10.1074/jbc.M111.270132

Abstact

Allergic reactions to peanuts and tree nuts are major causes of anaphylaxis in the United States. We compare different properties of natural and recombinant versions of Ara h 1, a major peanut allergen, through structural, immunologic, and bioinformatics analyses. Small angle x-ray scattering studies show that natural Ara h 1 forms higher molecular weight aggregates in solution. In contrast, the full-length recombinant protein is partially unfolded and exists as a monomer. The crystal structure of the Ara h 1 core (residues 170-586) shows that the central part of the allergen has a bicupin fold, which is in agreement with our bioinformatics analysis. In its crystalline state, the core region of Ara h 1 forms trimeric assemblies, while in solution the protein exists as higher molecular weight assemblies. This finding reveals that the residues forming the core region of the protein are sufficient for formation of Ara h 1 trimers and higher order oligomers. Natural and recombinant variants of proteins tested in in vitro gastric and duodenal digestion assays show that the natural protein is the most stable form, followed by the recombinant Ara h 1 core fragment and the full-length recombinant protein. Additionally, IgE binding studies reveal that the natural and recombinant allergens have different patterns of interaction with IgE antibodies. The molecular basis of cross-reactivity between vicilin allergens is also elucidated.

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Primary Citation of related structures