3S48 image
Entry Detail
PDB ID:
3S48
Title:
Human Alpha-Haemoglobin Complexed with the First NEAT Domain of IsdH from Staphylococcus aureus
Biological Source:
Host Organism:
PDB Version:
Deposition Date:
2011-05-19
Release Date:
2012-05-23
Method Details:
Experimental Method:
Resolution:
3.05 Å
R-Value Free:
0.26
R-Value Work:
0.24
R-Value Observed:
0.24
Space Group:
I 41
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Iron-regulated surface determinant protein H
Chain IDs:A, C (auth: B)
Chain Length:164
Number of Molecules:2
Biological Source:Staphylococcus aureus
Polymer Type:polypeptide(L)
Description:Hemoglobin subunit alpha
Chain IDs:B (auth: D), D (auth: C)
Chain Length:141
Number of Molecules:2
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
The structure of alpha-haemoglobin in complex with a haemoglobin-binding domain from Staphylococcus aureus reveals the elusive alpha-haemoglobin dimerization interface
ACTA CRYSTALLOGR.,SECT.F 70 1032 1037 (2014)
PMID: 25084376 DOI: 10.1107/S2053230X14012175

Abstact

Adult haemoglobin (Hb) is made up of two α and two β subunits. Mutations that reduce expression of the α- or β-globin genes lead to the conditions α- or β-thalassaemia, respectively. Whilst both conditions are characterized by anaemia of variable severity, other details of their pathophysiology are different, in part owing to the greater stability of the β chains that is conferred through β self-association. In contrast, α subunits interact weakly, and in the absence of stabilizing quaternary interactions the α chain (α) is prone to haem loss and denaturation. The molecular contacts that confer weak self-association of α have not been determined previously. Here, the first structure of an α2 homodimer is reported in complex with one domain of the Hb receptor from Staphylococcus aureus. The α2 dimer interface has a highly unusual, approximately linear, arrangement of four His side chains within hydrogen-bonding distance of each other. Some interactions present in the α1β1 dimer interface of native Hb are preserved in the α2 dimer. However, a marked asymmetry is observed in the α2 interface, suggesting that steric factors limit the number of stabilizing interactions that can form simultaneously across the interface.

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Primary Citation of related structures