3S1K image
Deposition Date 2011-05-15
Release Date 2011-08-17
Last Version Date 2024-10-30
Entry Detail
PDB ID:
3S1K
Title:
The Development of Peptide-based Tools for the Analysis of Angiogenesis
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
(Taxon ID: )
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.55 Å
R-Value Free:
0.27
R-Value Work:
0.22
R-Value Observed:
0.22
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Z-domain
Chain IDs:A, B
Chain Length:59
Number of Molecules:2
Biological Source:
Polymer Type:polypeptide(L)
Molecule:Vascular endothelial growth factor A
Gene (Uniprot):VEGFA
Chain IDs:C (auth: V), D (auth: W)
Chain Length:102
Number of Molecules:2
Biological Source:Homo sapiens
Primary Citation
The development of Peptide-based tools for the analysis of angiogenesis.
Chem.Biol. 18 839 845 (2011)
PMID: 21802005 DOI: 10.1016/j.chembiol.2011.05.011

Abstact

Limitations to the application of molecularly targeted cancer therapies are the inability to accurately match patient with effective treatment and the absence of a prompt readout of posttreatment response. Noninvasive agents that rapidly report vascular endothelial growth factor (VEGF) levels using positron emission tomography (PET) have the potential to enhance anti-angiogenesis therapies. Using phage display, two distinct classes of peptides were identified that bind to VEGF with nanomolar affinity and high selectivity. Co-crystal structures of these different peptide classes demonstrate that both bind to the receptor-binding region of VEGF. (18)F-radiolabelling of these peptides facilitated the acquisition of PET images of tumor VEGF levels in a HM7 xenograph model. The images obtained from one 59-residue probe, (18)F-Z-3B, 2 hr postinjection are comparable to those obtained with anti-VEGF antibody B20 72 hr postinjection. Furthermore, VEGF levels in growing SKOV3 tumors were followed using (18)F-Z-3B as a PET probe with VEGF levels increasing with tumor size.

Legend

Protein

Chemical

Disease

Primary Citation of related structures