3S1I image
Deposition Date 2011-05-15
Release Date 2011-09-21
Last Version Date 2024-03-20
Entry Detail
PDB ID:
3S1I
Title:
Crystal structure of oxygen-bound hell's gate globin I
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.77 Å
R-Value Free:
0.22
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
C 2 2 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Hemoglobin-like flavoprotein
Gene (Uniprot):hmp
Chain IDs:A, B, C
Chain Length:139
Number of Molecules:3
Biological Source:Methylacidiphilum infernorum
Primary Citation
Hell's Gate globin I: an acid and thermostable bacterial hemoglobin resembling mammalian neuroglobin
Febs Lett. 585 3250 3258 (2011)
PMID: 21925500 DOI: 10.1016/j.febslet.2011.09.002

Abstact

Hell's Gate globin I (HGbI), a heme-containing protein structurally homologous to mammalian neuroglobins, has been identified from an acidophilic and thermophilic obligate methanotroph, Methylacidiphilum infernorum. HGbI has very high affinity for O(2) and shows barely detectable autoxidation in the pH range of 5.2-8.6 and temperature range of 25-50°C. Examination of the heme pocket by X-ray crystallography and molecular dynamics showed that conformational movements of Tyr29(B10) and Gln50(E7), as well as structural flexibility of the GH loop and H-helix, may play a role in modulating its ligand binding behavior. Bacterial HGbI's unique resistance to the sort of extreme acidity that would extract heme from any other hemoglobin makes it an ideal candidate for comparative structure-function studies of the expanding globin superfamily.

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