3RZT image
Deposition Date 2011-05-12
Release Date 2011-12-28
Last Version Date 2023-09-13
Entry Detail
PDB ID:
3RZT
Title:
Neutron structure of perdeuterated rubredoxin using rapid (14 hours) data
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.75 Å
R-Value Free:
0.24
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Rubredoxin
Gene (Uniprot):rub
Chain IDs:A
Chain Length:54
Number of Molecules:1
Biological Source:Pyrococcus furiosus
Primary Citation
Rapid visualization of hydrogen positions in protein neutron crystallographic structures.
Acta Crystallogr.,Sect.D 68 35 41 (2012)
PMID: 22194331 DOI: 10.1107/S0907444911048402

Abstact

Neutron crystallography is a powerful technique for experimental visualization of the positions of light atoms, including hydrogen and its isotope deuterium. In recent years, structural biologists have shown increasing interest in the technique as it uniquely complements X-ray crystallographic data by revealing the positions of D atoms in macromolecules. With this regained interest, access to macromolecular neutron crystallography beamlines is becoming a limiting step. In this report, it is shown that a rapid data-collection strategy can be a valuable alternative to longer data-collection times in appropriate cases. Comparison of perdeuterated rubredoxin structures refined against neutron data sets collected over hours and up to 5 d shows that rapid neutron data collection in just 14 h is sufficient to provide the positions of 269 D atoms without ambiguity.

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Primary Citation of related structures