3RSE image
Deposition Date 2011-05-02
Release Date 2011-06-01
Last Version Date 2023-09-13
Entry Detail
PDB ID:
3RSE
Title:
Structural and biochemical characterization of two binding sites for nucleation promoting factor WASp-VCA on Arp2/3 complex
Biological Source:
Source Organism:
Bos taurus (Taxon ID: 9913)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.65 Å
R-Value Free:
0.25
R-Value Work:
0.21
R-Value Observed:
0.21
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Actin-related protein 3
Gene (Uniprot):ACTR3
Chain IDs:A
Chain Length:418
Number of Molecules:1
Biological Source:Bos taurus
Polymer Type:polypeptide(L)
Molecule:Actin-related protein 2
Gene (Uniprot):ACTR2
Chain IDs:B
Chain Length:394
Number of Molecules:1
Biological Source:Bos taurus
Polymer Type:polypeptide(L)
Molecule:Actin-related protein 2/3 complex subunit 1B
Gene (Uniprot):ARPC1B
Chain IDs:C
Chain Length:372
Number of Molecules:1
Biological Source:Bos taurus
Polymer Type:polypeptide(L)
Molecule:Actin-related protein 2/3 complex subunit 2
Gene (Uniprot):ARPC2
Chain IDs:D
Chain Length:300
Number of Molecules:1
Biological Source:Bos taurus
Polymer Type:polypeptide(L)
Molecule:Actin-related protein 2/3 complex subunit 3
Gene (Uniprot):ARPC3
Chain IDs:E
Chain Length:178
Number of Molecules:1
Biological Source:Bos taurus
Polymer Type:polypeptide(L)
Molecule:Actin-related protein 2/3 complex subunit 4
Gene (Uniprot):ARPC4
Chain IDs:F
Chain Length:168
Number of Molecules:1
Biological Source:Bos taurus
Polymer Type:polypeptide(L)
Molecule:Actin-related protein 2/3 complex subunit 5
Gene (Uniprot):ARPC5
Chain IDs:G
Chain Length:151
Number of Molecules:1
Biological Source:Bos taurus
Polymer Type:polypeptide(L)
Molecule:CA fragment of Bos taurus N-WASP
Chain IDs:H (auth: Z)
Chain Length:3
Number of Molecules:1
Biological Source:Bos taurus
Primary Citation
Structural and biochemical characterization of two binding sites for nucleation-promoting factor WASp-VCA on Arp2/3 complex.
Proc.Natl.Acad.Sci.USA 108 E463 E471 (2011)
PMID: 21676862 DOI: 10.1073/pnas.1100125108

Abstact

Actin-related protein (Arp) 2/3 complex mediates the formation of actin filament branches during endocytosis and at the leading edge of motile cells. The pathway of branch formation is ambiguous owing to uncertainty regarding the stoichiometry and location of VCA binding sites on Arp2/3 complex. Isothermal titration calorimetry showed that the CA motif from the C terminus of fission yeast WASP (Wsp1p) bound to fission yeast and bovine Arp2/3 complex with a stoichiometry of 2 to 1 and very different affinities for the two sites (K(d)s of 0.13 and 1.6 μM for fission yeast Arp2/3 complex). Equilibrium binding, kinetic, and cross-linking experiments showed that (i) CA at high-affinity site 1 inhibited Arp2/3 complex binding to actin filaments, (ii) low-affinity site 2 had a higher affinity for CA when Arp2/3 complex was bound to actin filaments, and (iii) Arp2/3 complex had a much higher affinity for free CA than VCA cross-linked to an actin monomer. Crystal structures showed the C terminus of CA bound to the low-affinity site 2 on Arp3 of bovine Arp2/3 complex. The C helix is likely to bind to the barbed end groove of Arp3 in a position for VCA to deliver the first actin subunit to the daughter filament.

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Primary Citation of related structures