3RIF image
Deposition Date 2011-04-13
Release Date 2011-05-25
Last Version Date 2024-11-20
Entry Detail
PDB ID:
3RIF
Title:
C. elegans glutamate-gated chloride channel (GluCl) in complex with Fab, ivermectin and glutamate.
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.35 Å
R-Value Free:
0.27
R-Value Work:
0.24
R-Value Observed:
0.24
Space Group:
P 43 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Avermectin-sensitive glutamate-gated chloride channel GluCl alpha
Chain IDs:A, B, C, D, E
Chain Length:347
Number of Molecules:5
Biological Source:Caenorhabditis elegans
Polymer Type:polypeptide(L)
Molecule:Mouse monoclonal Fab fragment, heavy chain
Chain IDs:F, G, H, I, J
Chain Length:221
Number of Molecules:5
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Molecule:Mouse monoclonal Fab fragment, light chain
Chain IDs:K, L, M, N, O
Chain Length:210
Number of Molecules:5
Biological Source:Mus musculus
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
ASN E ASN GLYCOSYLATION SITE
Primary Citation
Principles of activation and permeation in an anion-selective Cys-loop receptor.
Nature 474 54 60 (2011)
PMID: 21572436 DOI: 10.1038/nature10139

Abstact

Fast inhibitory neurotransmission is essential for nervous system function and is mediated by binding of inhibitory neurotransmitters to receptors of the Cys-loop family embedded in the membranes of neurons. Neurotransmitter binding triggers a conformational change in the receptor, opening an intrinsic chloride channel and thereby dampening neuronal excitability. Here we present the first three-dimensional structure, to our knowledge, of an inhibitory anion-selective Cys-loop receptor, the homopentameric Caenorhabditis elegans glutamate-gated chloride channel α (GluCl), at 3.3 Å resolution. The X-ray structure of the GluCl-Fab complex was determined with the allosteric agonist ivermectin and in additional structures with the endogenous neurotransmitter L-glutamate and the open-channel blocker picrotoxin. Ivermectin, used to treat river blindness, binds in the transmembrane domain of the receptor and stabilizes an open-pore conformation. Glutamate binds in the classical agonist site at subunit interfaces, and picrotoxin directly occludes the pore near its cytosolic base. GluCl provides a framework for understanding mechanisms of fast inhibitory neurotransmission and allosteric modulation of Cys-loop receptors.

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