3RCE image
Deposition Date 2011-03-31
Release Date 2011-06-15
Last Version Date 2025-03-26
Entry Detail
PDB ID:
3RCE
Title:
Bacterial oligosaccharyltransferase PglB
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.40 Å
R-Value Free:
0.27
R-Value Work:
0.23
R-Value Observed:
0.24
Space Group:
P 21 21 21
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Oligosaccharide transferase to N-glycosylate proteins
Gene (Uniprot):pglB
Mutagens:K2E
Chain IDs:A
Chain Length:724
Number of Molecules:1
Biological Source:Campylobacter lari
Polymer Type:polypeptide(L)
Molecule:Substrate Mimic Peptide
Chain IDs:B
Chain Length:8
Number of Molecules:1
Biological Source:
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
PPN B PHE PARA-NITROPHENYLALANINE
Ligand Molecules
Primary Citation
X-ray structure of a bacterial oligosaccharyltransferase.
Nature 474 350 355 (2011)
PMID: 21677752 DOI: 10.1038/nature10151

Abstact

Asparagine-linked glycosylation is a post-translational modification of proteins containing the conserved sequence motif Asn-X-Ser/Thr. The attachment of oligosaccharides is implicated in diverse processes such as protein folding and quality control, organism development or host-pathogen interactions. The reaction is catalysed by oligosaccharyltransferase (OST), a membrane protein complex located in the endoplasmic reticulum. The central, catalytic enzyme of OST is the STT3 subunit, which has homologues in bacteria and archaea. Here we report the X-ray structure of a bacterial OST, the PglB protein of Campylobacter lari, in complex with an acceptor peptide. The structure defines the fold of STT3 proteins and provides insight into glycosylation sequon recognition and amide nitrogen activation, both of which are prerequisites for the formation of the N-glycosidic linkage. We also identified and validated catalytically important, acidic amino acid residues. Our results provide the molecular basis for understanding the mechanism of N-linked glycosylation.

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Primary Citation of related structures