3RAE image
Entry Detail
PDB ID:
3RAE
Title:
Quinolone(Levofloxacin)-DNA cleavage complex of type IV topoisomerase from S. pneumoniae
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2011-03-28
Release Date:
2012-04-25
Method Details:
Experimental Method:
Resolution:
2.90 Å
R-Value Free:
0.22
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
P 31 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:DNA topoisomerase 4 subunit A
Chain IDs:A, B
Chain Length:496
Number of Molecules:2
Biological Source:Streptococcus pneumoniae
Polymer Type:polypeptide(L)
Description:DNA topoisomerase 4 subunit B
Chain IDs:C, D
Chain Length:268
Number of Molecules:2
Biological Source:Streptococcus pneumoniae
Primary Citation
Structure of a quinolone-stabilized cleavage complex of topoisomerase IV from Klebsiella pneumoniae and comparison with a related Streptococcus pneumoniae complex.
Acta Crystallogr.,Sect.D 72 488 496 (2016)
PMID: 27050128 DOI: 10.1107/S2059798316001212

Abstact

Klebsiella pneumoniae is a Gram-negative bacterium that is responsible for a range of common infections, including pulmonary pneumonia, bloodstream infections and meningitis. Certain strains of Klebsiella have become highly resistant to antibiotics. Despite the vast amount of research carried out on this class of bacteria, the molecular structure of its topoisomerase IV, a type II topoisomerase essential for catalysing chromosomal segregation, had remained unknown. In this paper, the structure of its DNA-cleavage complex is reported at 3.35 Å resolution. The complex is comprised of ParC breakage-reunion and ParE TOPRIM domains of K. pneumoniae topoisomerase IV with DNA stabilized by levofloxacin, a broad-spectrum fluoroquinolone antimicrobial agent. This complex is compared with a similar complex from Streptococcus pneumoniae, which has recently been solved.

Legend

Protein

Chemical

Disease

Primary Citation of related structures