3RA5 image
Deposition Date 2011-03-27
Release Date 2011-10-05
Last Version Date 2023-11-01
Entry Detail
PDB ID:
3RA5
Title:
Crystal structure of T. celer L30e E6A/R92A variant
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.80 Å
R-Value Free:
0.23
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 32
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:50S ribosomal protein L30e
Gene (Uniprot):rpl30e
Mutations:E6A, R92A
Chain IDs:A, B
Chain Length:101
Number of Molecules:2
Biological Source:Thermococcus celer
Ligand Molecules
Primary Citation
Stabilizing salt-bridge enhances protein thermostability by reducing the heat capacity change of unfolding
Plos One 6 e21624 e21624 (2011)
PMID: 21720566 DOI: 10.1371/journal.pone.0021624

Abstact

Most thermophilic proteins tend to have more salt bridges, and achieve higher thermostability by up-shifting and broadening their protein stability curves. While the stabilizing effect of salt-bridge has been extensively studied, experimental data on how salt-bridge influences protein stability curves are scarce. Here, we used double mutant cycles to determine the temperature-dependency of the pair-wise interaction energy and the contribution of salt-bridges to ΔC(p) in a thermophilic ribosomal protein L30e. Our results showed that the pair-wise interaction energies for the salt-bridges E6/R92 and E62/K46 were stabilizing and insensitive to temperature changes from 298 to 348 K. On the other hand, the pair-wise interaction energies between the control long-range ion-pair of E90/R92 were negligible. The ΔC(p) of all single and double mutants were determined by Gibbs-Helmholtz and Kirchhoff analyses. We showed that the two stabilizing salt-bridges contributed to a reduction of ΔC(p) by 0.8-1.0 kJ mol⁻¹ K⁻¹. Taken together, our results suggest that the extra salt-bridges found in thermophilic proteins enhance the thermostability of proteins by reducing ΔC(p), leading to the up-shifting and broadening of the protein stability curves.

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